Stem-loop csa-mir-31

Accession

MI0007187

Description

Ciona savignyi csa-mir-31 precursor miRNA

Sequence

augugacuagcacuaUGGCAAGAUGUUGGCAUAGCUauaaaaauguuaaacauagugugcuaaugucuagccuuggcgcuag
......(((((.(((.(((.(((((((((((((.((((.............))))))))))))))))).))).))).)))))

Structure

auguga     a   U   A             G    aaaaa 
      cuagc cua GGC AGAUGUUGGCAUA CUau     u
      ||||| ||| ||| ||||||||||||| ||||     g
      gaucg ggu ccg ucuguaaucgugu gaua     u
------     c   u   a             -    caaau 

Annotation confidence Not enough data

Genome context

reftig_48: 895318-895399 [-]

Mature csa-miR-31

• Accession: MIMAT0006121
• Description: Ciona savignyi csa-miR-31 mature miRNA
• Sequence: 16 - UGGCAAGAUGUUGGCAUAGCU - 36
• Evidence: not_experimental

References

1. PubMed ID: 18339653
   Altered miRNA repertoire in the simplified chordate, Oikopleura dioica
   "Fu X, Adamski M, Thompson EM"
   "Mol Biol Evol (2008) 25:1067-1080