Stem-loop mml-mir-122a

Accession

MI0007613

Description

Macaca mulatta mml-mir-122a precursor miRNA mir-122

Gene
family

RF00684; mir-122

Literature search

4 open access papers mention mml-mir-122a
(11 sentences)

Sequence

10686 reads, 88 reads per million, 9 experiments

ccuuagcagagcugUGGAGUGUGACAAUGGUGUUUGugucuaaacuaucaaACGCCAUUAUCACACUAAAUAgcuacuacuaggc
.(((((.((((((((..(((((((.(((((((((((............))))))))))).)))))))..)))))).)).))))).

Structure

c     c  -      GG       C           ugucu 
 cuuag ag agcugU  AGUGUGA AAUGGUGUUUG     a
 ||||| || ||||||  ||||||| |||||||||||      
 ggauc uc ucgAUA  UCACACU UUACCGCAaac     a
c     a  a      AA       A           uauca 

Annotation confidence Not enough data

Genome context

chr18: 47923530-47923614 [+]

Mature mml-miR-122a-5p

• Accession: MIMAT0006180
• Description: Macaca mulatta mml-miR-122a-5p mature miRNA
• Sequence: 15 - UGGAGUGUGACAAUGGUGUUUG - 36
• Evidence: experimental ; Illumina [2]

Mature mml-miR-122a-3p

• Accession: MIMAT0026813
• Description: Macaca mulatta mml-miR-122a-3p mature miRNA
• Sequence: 52 - ACGCCAUUAUCACACUAAAUA - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45