Stem-loop mml-mir-429

Accession

MI0007742

Description

Macaca mulatta mml-mir-429 precursor miRNA mir-8

Gene
family

RF00241; mir-8

Literature search

5 open access papers mention mml-mir-429
(5 sentences)

Sequence

245793 reads, 407.0 reads per million, 128 experiments

cgccggccgaugagCGUCUUACCAGACACGGUUAGACcuggcucucugucUAAUACUGUCUGGUAAAACCGUccauccgcggc
.((((.(.((((.(((..((((((((((..(((((((..........)))))))..))))))))))...))).)))).)))))

Structure

c    g c    a   -UC          CG       cugg 
 gccg c gaug gCG   UUACCAGACA  GUUAGAC    c
 |||| | |||| |||   ||||||||||  |||||||     
 cggc g cuac UGC   AAUGGUCUGU  UAAUcug    u
-    - c    c   CAA          CA       ucuc 

Annotation confidence High

Genome context

1: 223251438-223251520 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-429

Mature mml-miR-429-5p

• Accession: MIMAT0026873
• Description: Macaca mulatta mml-miR-429-5p mature miRNA
• Sequence: 15 - CGUCUUACCAGACACGGUUAGAC - 37
• Evidence: experimental ; Illumina [2]

Mature mml-miR-429-3p

• Accession: MIMAT0006325
• Description: Macaca mulatta mml-miR-429-3p mature miRNA
• Sequence: 51 - UAAUACUGUCUGGUAAAACCGU - 72
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45