Accession
MI0008211
Description
Sus scrofa
ssc-mir-15a precursor miRNA
Literature search
43 open access papers mention ssc-mir-15a
(126 sentences)
(126 sentences)
Sequence
691347
reads,
396.0
reads per million, 211 experiments
uuggaguaaagUAGCAGCACAUAAUGGUUUGUggauuuugaaaaggugCAGGCCAUAUUGUGCUGCCUCaaaaauacaa
..........(..((((((((..((((((((((.............))))))))))..))))))))..)..........
..........(..((((((((..((((((((((.............))))))))))..))))))))..)..........
Structure
uuggaguaaa UA UA gauuu
g GCAGCACA AUGGUUUGUg u
| |||||||| |||||||||| g
C CGUCGUGU UACCGGACgu a
aacauaaaaa UC UA ggaaa
Annotation confidence
High
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Genome context
chrUScaf2048: 70414-70492 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-15a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-15a-5p
| Accession | MIMAT0007753 |
| Description | Sus scrofa ssc-miR-15a-5p mature miRNA |
| Sequence | 12 - UAGCAGCACAUAAUGGUUUGU - 32 |
| Evidence |
experimental
cloned [1,3], Illumina [2,4-5] |
Mature ssc-miR-15a-3p
| Accession | MIMAT0052590 |
| Description | Sus scrofa ssc-miR-15a-3p mature miRNA |
| Sequence | 49 - CAGGCCAUAUUGUGCUGCCUC - 69 |
| Evidence |
experimental
cloned [1,3], Illumina [2,4-5] |
References
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