Accession
MI0008214
Description
Sus scrofa
ssc-mir-17 precursor miRNA
Literature search
30 open access papers mention ssc-mir-17
(84 sentences)
(84 sentences)
Sequence
334
reads,
89
reads per million, 12 experiments
gaauaauguCAAAGUGCUUACAGUGCAGGUAGugauaaugugcaucuACUGCAGUGAAGGCACUUGUAGcauuaugg
..(((((((..((((((((.((.(((((.(((((........)).)))))))).)).))))))))...)))))))..
..(((((((..((((((((.((.(((((.(((((........)).)))))))).)).))))))))...)))))))..
Structure
ga -CA A G G - aua auaaugu AAGUGCUU CA UGCAG UAG ug a ||||||| |||||||| || ||||| ||| || uauuacG UUCACGGA GU ACGUC Auc ac u gg AUG A G - u gug
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
chr11: 66610060-66610136 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from ssc-mir-17
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-17-5p
| Accession | MIMAT0007755 |
| Description | Sus scrofa ssc-miR-17-5p mature miRNA |
| Sequence | 10 - CAAAGUGCUUACAGUGCAGGUAG - 32 |
| Evidence |
experimental
cloned [1,3], Illumina [2,4-5] |
Mature ssc-miR-17-3p
| Accession | MIMAT0015268 |
| Description | Sus scrofa ssc-miR-17-3p mature miRNA |
| Sequence | 48 - ACUGCAGUGAAGGCACUUGUAG - 69 |
| Evidence |
experimental
Illumina [2,4-5] |
References
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