Accession
MI0008215
Description
Sus scrofa
ssc-mir-30b precursor miRNA
Literature search
20 open access papers mention ssc-mir-30b
(38 sentences)
(38 sentences)
Sequence
147
reads,
100
reads per million, 10 experiments
uuucaguucgUGUAAACAUCCUACACUCAGCUguaauacauggauuggCUGGGAGGUGGAUGUUUACUUcagcuga
..((((((...((((((((((.((.((((((((............))))))))..))))))))))))...))))))
..((((((...((((((((((.((.((((((((............))))))))..))))))))))))...))))))
Structure
uu cgU U -A uaaua ucaguu GUAAACAUCC AC CUCAGCUg c |||||| |||||||||| || |||||||| agucga CAUUUGUAGG UG GGGUCggu a -- cUU - GA uaggu
Annotation confidence
Not enough data
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Genome context
chr4: 6717643-6717718 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-30b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-30b-5p
| Accession | MIMAT0007756 |
| Description | Sus scrofa ssc-miR-30b-5p mature miRNA |
| Sequence | 11 - UGUAAACAUCCUACACUCAGCU - 32 |
| Evidence |
experimental
cloned [1,4], 454 [2], Illumina [3,5-6] |
Mature ssc-miR-30b-3p
| Accession | MIMAT0015269 |
| Description | Sus scrofa ssc-miR-30b-3p mature miRNA |
| Sequence | 49 - CUGGGAGGUGGAUGUUUACUU - 69 |
| Evidence |
experimental
Illumina [3,5-6] |
References
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