Accession
MI0008219
Description
Sus scrofa
ssc-mir-199b precursor miRNA
Literature search
12 open access papers mention ssc-mir-199b
(15 sentences)
(15 sentences)
Sequence
3334
reads,
947
reads per million, 15 experiments
ccgucuaCCCAGUGUUUAGACUAUCUGUUcaggacucccaaauugUACAGUAGUCUGCACAUUGGUUaggcugg
(((((((.(((((((.(((((((.((((.(((..........))).))))))))))).))))))).))))).))
(((((((.(((((((.(((((((.((((.(((..........))).))))))))))).))))))).))))).))
Structure
- C U U U gacu cc gucua CCAGUGU UAGACUA CUGU cag c || ||||| ||||||| ||||||| |||| ||| gg cggaU GGUUACA GUCUGAU GACA guu c u U C - U aaac
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr1: 302681826-302681899 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-mir-199b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-199b-5p
| Accession | MIMAT0017339 |
| Description | Sus scrofa ssc-miR-199b-5p mature miRNA |
| Sequence | 8 - CCCAGUGUUUAGACUAUCUGUU - 29 |
| Evidence |
experimental
cloned [3], Illumina [4-5] |
Mature ssc-miR-199b-3p
| Accession | MIMAT0007760 |
| Description | Sus scrofa ssc-miR-199b-3p mature miRNA |
| Sequence | 46 - UACAGUAGUCUGCACAUUGGUU - 67 |
| Evidence |
experimental
cloned [1], Illumina [2,4-5] |
References
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