Stem-loop tca-mir-8

Accession

MI0008898

Description

Tribolium castaneum tca-mir-8 precursor miRNA

Literature search

1 open access papers mention tca-mir-8
(4 sentences)

Sequence

acuguuaaCAUCUUACCGGGCAGCAUUAGAuuacauuuuauacuucUAAUACUGUCAGGUAAAGAUGUCcucc
.......((((((((((.(((((.((((((..............)))))).))))).))).))))))).....

Structure

acuguua       -   G     C      uuacau 
       aCAUCUU ACC GGCAG AUUAGA      u
       ||||||| ||| ||||| ||||||       
       UGUAGAA UGG CUGUC UAAUcu      u
--ccucC       A   A     A      ucauau 

Annotation confidence Not enough data

Genome context

Unknown

Mature tca-miR-8-3p

• Accession: MIMAT0008356
• Description: Tribolium castaneum tca-miR-8-3p mature miRNA
• Sequence: 47 - UAAUACUGUCAGGUAAAGAUGUC - 69
• Evidence: experimental ; SOLID [2]

Mature tca-miR-8-5p

• Accession: MIMAT0019100
• Description: Tribolium castaneum tca-miR-8-5p mature miRNA
• Sequence: 9 - CAUCUUACCGGGCAGCAUUAGA - 30
• Evidence: experimental ; SOLID [2]

References

1. PubMed ID: 18651924
   In silico prediction and characterization of microRNAs from red flour beetle (Tribolium castaneum)
   "Singh J, Nagaraju J"
   "Insect Mol Biol (2008) 17:427-436


2. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696