Stem-loop tca-mir-137

Accession

MI0008915

Description

Tribolium castaneum tca-mir-137 precursor miRNA

Literature search

3 open access papers mention tca-mir-137
(6 sentences)

Sequence

29975 reads, 270.0 reads per million, 34 experiments

ugguuggucACGUGUAUUCUUGGGUAAUUAAcacauauucagggaugUUAUUGCUUGAGAAUACACGUAGcugacaa
..((((((.(((((((((((((((((((.((((............))))))))))))))))))))))).))))))..

Structure

ug      c                   U    cauau 
  guuggu ACGUGUAUUCUUGGGUAAU AAca     u
  |||||| ||||||||||||||||||| ||||      
  cagucG UGCACAUAAGAGUUCGUUA UUgu     c
aa      A                   -    aggga 

Annotation confidence High

Genome context

ref|NC_007422.5|: 3734611-3734687 [+]

Mature tca-miR-137-5p

• Accession: MIMAT0019117
• Description: Tribolium castaneum tca-miR-137-5p mature miRNA
• Sequence: 10 - ACGUGUAUUCUUGGGUAAUUAA - 31
• Evidence: experimental ; SOLID [2]

Mature tca-miR-137-3p

• Accession: MIMAT0008373
• Description: Tribolium castaneum tca-miR-137-3p mature miRNA
• Sequence: 48 - UUAUUGCUUGAGAAUACACGUAG - 70
• Evidence: experimental ; SOLID [2]

References

1. PubMed ID: 18651924
   In silico prediction and characterization of microRNAs from red flour beetle (Tribolium castaneum)
   "Singh J, Nagaraju J"
   "Insect Mol Biol (2008) 17:427-436


2. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696