Stem-loop dsi-mir-318

Accession

MI0009474

Description

Drosophila simulans dsi-mir-318 precursor miRNA

Sequence

136 reads, 2859.0 reads per million, 1 experiments

uuuaugggauacacacaguucaguuuugucacacuuuaagcaUCACUGGGCUUUGUUUAUCUCAugag
.((((((((((.(((.((((((((..(((..........)))..)))))))).))).)))))))))).

Structure

u          c   c        uu   caca 
 uuaugggaua aca aguucagu  ugu    c
 |||||||||| ||| ||||||||  |||     
 aguACUCUAU UGU UCGGGUCA  acg    u
g          U   U        CU   aauu 

Annotation confidence Not enough data

Genome context

ref|NT_479536.1|: 14842654-14842721 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dsi-mir-318

Mature dsi-miR-318-3p

• Accession: MIMAT0008907
• Description: Drosophila simulans dsi-miR-318-3p mature miRNA
• Sequence: 43 - UCACUGGGCUUUGUUUAUCUCA - 64
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9


2. PubMed ID: 17994087
   Evolution of genes and genomes on the Drosophila phylogeny
   "Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, Abad JP, Abt DN, Adryan B, Aguade M, Akashi H, Anderson WW, Aquadro CF, Ardell DH, Arguello R, Artie"
   "Nature (2007) 450:203-218