Stem-loop mmu-mir-669l

Accession

MI0009942

Symbol

MGI: Mir669l

Description

Mus musculus mmu-mir-669l precursor miRNA

Literature search

8 open access papers mention mmu-mir-669l
(11 sentences)

Sequence

2822 reads, 86 reads per million, 91 experiments

guuugugcaugugcguauAGUUGUGUGUGCAUGUAUAUGUguguauaugaauauacAUAUACAUACACACCCAUAUAUacacgcauucauaugaacac
(((((((.(((((.(((((..((.(((((.((((((((((((((......)))))))))))))).))))).))..))))).))))).)))..))))..

Structure

--    --   c     c     GU  U     C              au 
  guuu  gug augug guauA  UG GUGUG AUGUAUAUGUgugu  a
  ||||  ||| ||||| |||||  || ||||| ||||||||||||||   
  caag  uac uacgc caUAU  AC CACAC UACAUAUAcauaua  u
ca    ua   u     a     AU  C     A              ag 

Annotation confidence High

Genome context

chr2: 10468971-10469068 [+]

Clustered miRNAs

21 other miRNAs are < 10 kb from mmu-mir-669l

Mature mmu-miR-669l-5p

• Accession: MIMAT0009418
• Description: Mus musculus mmu-miR-669l-5p mature miRNA
• Sequence: 19 - AGUUGUGUGUGCAUGUAUAUGU - 40
• Evidence: experimental ; Illumina [1-3]

Mature mmu-miR-669l-3p

• Accession: MIMAT0017345
• Description: Mus musculus mmu-miR-669l-3p mature miRNA
• Sequence: 57 - AUAUACAUACACACCCAUAUAU - 78
• Evidence: experimental ; Illumina [3]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


2. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797


3. PubMed ID: 18923076
   Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs
   "Babiarz JE, Ruby JG, Wang Y, Bartel DP, Blelloch R"
   "Genes Dev (2008) 22:2773-2785