Stem-loop mmu-mir-669m-2

Accession

MI0009944

Symbol

MGI: Mir669m-2

Description

Mus musculus mmu-mir-669m-2 precursor miRNA

Literature search

11 open access papers mention mmu-mir-669m-2
(17 sentences)

Sequence

4244 reads, 28.0 reads per million, 128 experiments

auauuugcauguguguauAGUUUUGUGUGCAUGUGCAUGUGUguauaugaauauaCAUAUACAUCCACACAAACAUAUacaagcaugcacagauauac
((((((((((((.((((((..((((((((.(((((.((((((((......)))))))).))))).))))))))..)))))).)))))))..)))))..

Structure

--     --       g      GU        C     C        au 
  auauu  ugcaugu uguauA  UUUGUGUG AUGUG AUGUGUgu  a
  |||||  ||||||| ||||||  |||||||| ||||| ||||||||   
  uauag  acguacg acaUAU  AAACACAC UACAU UACauaua  u
ca     ac       a      AC        C     A        ag 

Annotation confidence High

Genome context

2: 10518245-10518342 [+]

Clustered miRNAs

13 other miRNAs are < 10 kb from mmu-mir-669m-2

Mature mmu-miR-669m-5p

• Accession: MIMAT0017346
• Description: Mus musculus mmu-miR-669m-5p mature miRNA
• Sequence: 19 - AGUUUUGUGUGCAUGUGCAUGUGU - 42
• Evidence: experimental ; Illumina [2]

Mature mmu-miR-669m-3p

• Accession: MIMAT0009419
• Description: Mus musculus mmu-miR-669m-3p mature miRNA
• Sequence: 56 - CAUAUACAUCCACACAAACAUAU - 78
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


2. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797