Stem-loop mmu-mir-1954

Accession

MI0009949

Symbol

MGI: Mir1954

Description

Mus musculus mmu-mir-1954 precursor miRNA mir-1954

Gene
family

RF03573; mir-1954

Literature search

2 open access papers mention mmu-mir-1954
(3 sentences)

Sequence

3493 reads, 24.0 reads per million, 116 experiments

gaggucagccagaACUGCAGAGUGAGACCCUGUUguuuguuuguuuguuugagacgggGUUUCUCUGUGUAGCCCUGGCuauccua
.(((..((((((..(((((.((.(((((((((((..................))))))))))).)).)))))..))))))..))).

Structure

g   uc      aA     G  U           guuuguuu 
 agg  agccag  CUGCA AG GAGACCCUGUU        g
 |||  ||||||  ||||| || |||||||||||         
 ucc  uCGGUC  GAUGU UC CUUUGgggcag        u
a   ua      CC     G  U           aguuuguu 

Annotation confidence Low

Genome context

2: 32542341-32542426 [+]

Mature mmu-miR-1954-5p

• Accession: MIMAT0009425
• Description: Mus musculus mmu-miR-1954-5p mature miRNA
• Sequence: 14 - ACUGCAGAGUGAGACCCUGUU - 34
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-1954-3p

• Accession: MIMAT0050712
• Description: Mus musculus mmu-miR-1954-3p mature miRNA
• Sequence: 59 - GUUUCUCUGUGUAGCCCUGGC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797