Stem-loop mmu-mir-1955

Accession

MI0009950

Symbol

MGI: Mir1955

Description

Mus musculus mmu-mir-1955 precursor miRNA

Literature search

2 open access papers mention mmu-mir-1955
(2 sentences)

Sequence

887 reads, 3.0 reads per million, 101 experiments

cugguuuacuuacuacaAGUCCCAGGAUGCACUGCAGCUUUuucuuaacuucagauaaGAGCAUUGCAUGCUGGGACAUGUaguugguuuaaauagca
(((....(((.((((((.(((((((.(((((.(((..(((..(((.......))).))).))).))))).))))))).)))))).))).....)))..

Structure

--   -guuu   u      A       G     C   AG   Uu   ua 
  cug     acu acuaca GUCCCAG AUGCA UGC  CUU  ucu  a
  |||     ||| |||||| ||||||| ||||| |||  |||  |||  c
  gau     ugg ugaUGU CAGGGUC UACGU ACG  Gaa  aga  u
ac   aaauu   u      A       G     U   -A   -u   cu 

Annotation confidence High

Genome context

2: 92022322-92022419 [+]

Mature mmu-miR-1955-5p

• Accession: MIMAT0009426
• Description: Mus musculus mmu-miR-1955-5p mature miRNA
• Sequence: 18 - AGUCCCAGGAUGCACUGCAGCUUU - 41
• Evidence: experimental ; Illumina [1-2]

Mature mmu-miR-1955-3p

• Accession: MIMAT0017348
• Description: Mus musculus mmu-miR-1955-3p mature miRNA
• Sequence: 59 - GAGCAUUGCAUGCUGGGACAUGU - 81
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


2. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797