Stem-loop mmu-mir-1960

Accession

MI0009957

Symbol

MGI: Mir1960

Description

Mus musculus mmu-mir-1960 precursor miRNA

Literature search

1 open access papers mention mmu-mir-1960
(2 sentences)

Sequence

1266 reads, 18 reads per million, 66 experiments

cagagugagcagCCAGUGCUGUUAGAAGAGGGCUgagagcagggagagcucucuucugcagcacugacuuuuccucug
(((((.(((.((.(((((((((.(((((((((((............)))))))))))))))))))).)).))))))))

Structure

     u   c  C         U           gagag 
cagag gag ag CAGUGCUGU AGAAGAGGGCU     c
||||| ||| || ||||||||| |||||||||||      
gucuc cuu uc gucacgacg ucuucucucga     a
     -   u  a         -           gaggg 

Annotation confidence High

Genome context

chr5: 30170739-30170816 [+]

Mature mmu-miR-1960

• Accession: MIMAT0009433
• Description: Mus musculus mmu-miR-1960 mature miRNA
• Sequence: 13 - CCAGUGCUGUUAGAAGAGGGCU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797