Stem-loop mmu-mir-1961

Accession

MI0009958

Symbol

MGI: Mir1961

Description

Mus musculus mmu-mir-1961 precursor miRNA

Literature search

1 open access papers mention mmu-mir-1961
(2 sentences)

Sequence

5 reads, 1 reads per million, 4 experiments

gcuagccauaucugaaguucaacacgcccuccccucuuccuauacgucuauggaggauuuaccuccauauaccuugagagaUGAGGUAGUAGUUAGAAcuuucauggagcaa
(((..((((....((((((((((((..((((..(((((.......((.((((((((.....)))))))).))...)))))..))))..)).))).))))))).)))))))..

Structure

--   ag    aucu       -   -  gc    cc     ccuauac  c        a 
  gcu  ccau    gaaguuc aac ac  ccuc  cucuu       gu uauggagg u
  |||  ||||    ||||||| ||| ||  ||||  |||||       || |||||||| u
  cga  ggua    uuucAAG UUG UG  GGAG  gagag       ca auaccucc u
aa   --    ---c       A   A  AU    Ua     ----uuc  u        a 

Annotation confidence Not enough data

Genome context

chr5: 92788451-92788562 [-]

Mature mmu-miR-1961

• Accession: MIMAT0009434
• Description: Mus musculus mmu-miR-1961 mature miRNA
• Sequence: 82 - UGAGGUAGUAGUUAGAA - 98
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797