Stem-loop mmu-mir-1962

Accession

MI0009959

Symbol

MGI: Mir1962

Description

Mus musculus mmu-mir-1962 precursor miRNA

Literature search

2 open access papers mention mmu-mir-1962
(2 sentences)

Sequence

64 reads, 3.0 reads per million, 19 experiments

uguggcauuugcaaacuauguagucagucaguggucccaUCUGUCUGCCUCUCUCUCguucaguuuccauggAGAGGCUGGCACUGGGACACAUgacugaugguaugcuccccgcugcagu
((((((....(((.(((.....((((((((...((((((..((((.((((((((...(........)...)))))))).)))).))))))...))))))))))).))).....))))))..

Structure

--      -auuu   a   augua        gug      UC    U        CUC uuc 
  uguggc     gca acu     gucaguca   guccca  UGUC GCCUCUCU   g   a
  ||||||     ||| |||     ||||||||   ||||||  |||| ||||||||   |    
  acgucg     cgu ugg     uagucagU   CAGGGU  ACGG CGGAGAgg   c   g
ug      ccccu   a   -----        ACA      -C    U        uac uuu 

Annotation confidence Medium

Genome context

7: 135167891-135168011 [+]

Mature mmu-miR-1962-5p

• Accession: MIMAT0050715
• Description: Mus musculus mmu-miR-1962-5p mature miRNA
• Sequence: 40 - UCUGUCUGCCUCUCUCUC - 57
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-1962-3p

• Accession: MIMAT0009435
• Description: Mus musculus mmu-miR-1962-3p mature miRNA
• Sequence: 73 - AGAGGCUGGCACUGGGACACAU - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797