Stem-loop mmu-mir-1966

Accession

MI0009963

Symbol

MGI: Mir1966

Description

Mus musculus mmu-mir-1966 precursor miRNA

Sequence

116 reads, 5 reads per million, 41 experiments

guagaauaguguuggAAGGGAGCUGGCUCAGGAGAGAGUCcugagauuuaggcucUUUCUGACUCAACUCUCCCUUAGcaagucaaguccauugaacgcuuucuucga
(.((((.((((((.((..((((((.(((.(((.((((((..((((..(((((.....)))))))))))))))))).))).)))....))).)).)))))))))).)..

Structure

-- u    u      g  AG   ----   G   C   A      Cc    au     c 
  g agaa aguguu gA  GGA    GCU GCU AGG GAGAGU  ugag  uuagg u
  | |||| |||||| ||  |||    ||| ||| ||| ||||||  ||||  ||||| c
  c ucuu ucgcaa uu  ccu    uga cGA UCC CUCUCA  ACUC  AGUCU U
ag u    -      g  -a   gaac   a   U   -      --    --     U 

Annotation confidence Not enough data

Genome context

chr8: 105615466-105615573 [+]

Mature mmu-miR-1966-5p

• Accession: MIMAT0009439
• Description: Mus musculus mmu-miR-1966-5p mature miRNA
• Sequence: 16 - AAGGGAGCUGGCUCAGGAGAGAGUC - 40
• Evidence: experimental ; Illumina [1]

Mature mmu-miR-1966-3p

• Accession: MIMAT0022952
• Description: Mus musculus mmu-miR-1966-3p mature miRNA
• Sequence: 56 - UUUCUGACUCAACUCUCCCUUAG - 78
• Evidence: not_experimental

References

1. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797