Stem-loop bfl-mir-29a

Accession

MI0010015

Description

Branchiostoma floridae bfl-mir-29a precursor miRNA

Gene family

MIPF0000009; mir-29

Sequence

uccugggaauucugugcacggaaGCUGAUUUCAGUUGGUGCUAGAuagaagucggcguucUAGCACCAUAUGAAAUCAGUUAUcggugcauaggc
..........(((((((((.(((((((((((((..((((((((((..(.......)..))))))))))..))))))))))).)).))))))))).

Structure

uccugggaau         g  -           GU          ua aa 
          ucugugcac ga aGCUGAUUUCA  UGGUGCUAGA  g  g
          ||||||||| || |||||||||||  ||||||||||  |  u
          ggauacgug cU UUGACUAAAGU  ACCACGAUcu  c  c
---------c         g  A           AU          ug gg 

Annotation confidence Not enough data

Genome context

Unknown

Mature bfl-miR-29a-3p

• Accession: MIMAT0009471
• Description: Branchiostoma floridae bfl-miR-29a-3p mature miRNA
• Sequence: 61 - UAGCACCAUAUGAAAUCAGUUAU - 83
• Evidence: experimental ; 454 [1]

Mature bfl-miR-29a-5p

• Accession: MIMAT0019139
• Description: Branchiostoma floridae bfl-miR-29a-5p mature miRNA
• Sequence: 24 - GCUGAUUUCAGUUGGUGCUAGA - 45
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27