Stem-loop bfl-mir-124

Accession

MI0010026

Description

Branchiostoma floridae bfl-mir-124 precursor miRNA

Sequence

cggcaaaucucggcuuggcucuuAGUGUUCACGGCGGUCCUUAAUuuaacauugugcaauUAAGGCACGCGGUGAAUGCCAAgaacagggccaaauccuca
...........(((((.(.((((.((((((((.(((..((((((((..((...))..))))))))..))).)))))))).)))).).))))).........

Structure

cggcaaaucuc     g c    A        G   GU        ua  a 
           ggcuu g ucuu GUGUUCAC GCG  CCUUAAUu  ac  
           ||||| | |||| |||||||| |||  ||||||||  || u
           ccggg c agAA CGUAAGUG CGC  GGAAUuaa  ug  
--acuccuaaa     a a    C        G   AC        cg  u 

Annotation confidence Low

Genome context

GG666480.1: 1879911-1880011 [+]

Mature bfl-miR-124-3p

• Accession: MIMAT0009482
• Description: Branchiostoma floridae bfl-miR-124-3p mature miRNA
• Sequence: 61 - UAAGGCACGCGGUGAAUGCCAA - 82
• Evidence: experimental ; 454 [1]

Mature bfl-miR-124-5p

• Accession: MIMAT0019146
• Description: Branchiostoma floridae bfl-miR-124-5p mature miRNA
• Sequence: 24 - AGUGUUCACGGCGGUCCUUAAU - 45
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27