Stem-loop sko-mir-7

Accession

MI0010146

Description

Saccoglossus kowalevskii sko-mir-7 precursor miRNA

Sequence

gugucacauaccauaUGGAAGACUAGUGAUUUUGUUGUugucaccuguuccaaacaAAAAAUCACAGUCUGCCAUUaugguguuug
....((.(((((((((((.(((((.((((((((.(((((.............)))))))))))))))))).))).)))))))).))

Structure

gugu  c        -   A     A        G     gucac 
    ca auaccaua UGG AGACU GUGAUUUU UUGUu     c
    || |||||||| ||| ||||| |||||||| |||||     u
    gu ugugguaU ACC UCUGA CACUAAAA Aacaa     g
----  u        U   G     -        -     accuu 

Annotation confidence Low

Genome context

GL010990.1: 410972-411057 [+]

Mature sko-miR-7-5p

• Accession: MIMAT0009608
• Description: Saccoglossus kowalevskii sko-miR-7-5p mature miRNA
• Sequence: 16 - UGGAAGACUAGUGAUUUUGUUGU - 38
• Evidence: experimental ; 454 [1]

Mature sko-miR-7-3p

• Accession: MIMAT0019153
• Description: Saccoglossus kowalevskii sko-miR-7-3p mature miRNA
• Sequence: 57 - AAAAAUCACAGUCUGCCAUU - 76
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27