Stem-loop sko-mir-200

Accession

MI0010147

Description

Saccoglossus kowalevskii sko-mir-200 precursor miRNA mir-8

Gene
family

RF00241; mir-8

Sequence

gaugcgaugugaauucaauugacaucuuacccgacagcauuagacuuguuaugcauucucUAAUACUGUCUGGUAAUGAUGUUaauagauuucaccaucuc
.....((((((((.((.((((((((((((((.(((((.((((((..(((...)))...)))))).))))).))))).))))))))).)).)))).))))..

Structure

gaugc    -    u  a         -     c     c      -cu   u 
     gaug ugaa uc auugacauc uuacc gacag auuaga   ugu  
     |||| |||| || ||||||||| ||||| ||||| ||||||   ||| a
     cuac acuu ag uaaUUGUAG AAUGG CUGUC UAAUcu   acg  
---cu    c    u  a         U     U     A      cuu   u 

Annotation confidence Low

Genome context

GL011827.1: 167988-168088 [+]

Mature sko-miR-200

• Accession: MIMAT0009609
• Description: Saccoglossus kowalevskii sko-miR-200 mature miRNA
• Sequence: 61 - UAAUACUGUCUGGUAAUGAUGUU - 83
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68