Accession
MI0010160
Description
Saccoglossus kowalevskii
sko-mir-96 precursor miRNA
Sequence
ccuuUUUGGCACUAGCACAUUUUGCugucuuuuuauaucagCGAAAGUAUGCUAGUGGCAAGCaggacgucaucgaccuuucauccgg
(((.((((.((((((((..((((((((...........))))))))...)))))))).)))).)))..(((...)))...........
(((.((((.((((((((..((((((((...........))))))))...)))))))).)))).)))..(((...)))...........
Structure
---------------------- u G -CA ucuu
ccu UUUG CACUAGCA UUUUGCug u
||| |||| |||||||| |||||||| u
gga GAAC GUGAUCGU AAAGCgac u
ggccuacuuuccagcuacugca C G AUG uaua
Annotation confidence
Low
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Genome context
GL011980.1: 36622-36709 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from sko-mir-96
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature sko-miR-96-5p
| Accession | MIMAT0009622 |
| Description | Saccoglossus kowalevskii sko-miR-96-5p mature miRNA |
| Sequence | 5 - UUUGGCACUAGCACAUUUUGC - 25 |
| Evidence |
experimental
454 [1] |
Mature sko-miR-96-3p
| Accession | MIMAT0019156 |
| Description | Saccoglossus kowalevskii sko-miR-96-3p mature miRNA |
| Sequence | 42 - CGAAAGUAUGCUAGUGGCAAGC - 63 |
| Evidence |
experimental
454 [2] |
References
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