Stem-loop spu-mir-29a

Accession

MI0010192

Description

Strongylocentrotus purpuratus spu-mir-29a precursor miRNA

Literature search

1 open access papers mention spu-mir-29a
(1 sentences)

Sequence

caaucuuccucuacugccugguugcaacugguggauaguguucuguuguagagucgaucuAAGCACCAGUUGAAAUCAGAGCuguaggggaagacccucau
...(((((((((((.((((((((.(((((((((..((((((((((...))))).))..)))..))))))))).)))))).)).))))))))))).......

Structure

----caa           u  -      g         ga   --  -     u 
       ucuuccucuac gc cugguu caacuggug  uag  ug uucug  
       ||||||||||| || |||||| |||||||||  |||  || ||||| u
       agaaggggaug CG GACUAA GUUGACCAC  Auc  gc gagau  
uacuccc           u  A      A         GA   ua  u     g 

Annotation confidence Not enough data

Genome context

KN913988.1: 525307-525407 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from spu-mir-29a

Mature spu-miR-29a

• Accession: MIMAT0009656
• Description: Strongylocentrotus purpuratus spu-miR-29a mature miRNA
• Sequence: 61 - AAGCACCAGUUGAAAUCAGAGC - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68