Stem-loop spu-mir-33

Accession

MI0010194

Description

Strongylocentrotus purpuratus spu-mir-33 precursor miRNA

Literature search

1 open access papers mention spu-mir-33
(2 sentences)

Sequence

aucucuuucuuguagccaugGUGCAUUGUCGUUGCAUUGCAUgugucucuauaccccuauguagugcaagaacagugcaauauggaggcaagauaagcagc
..(((((((((((..(((((.((((((((..(((((((((((((((....))))....)))))))))))..)))))))).)))))..)))))).))).)).

Structure

au  -   -      ag     G        CG           ----    c 
  cu cuu ucuugu  ccaug UGCAUUGU  UUGCAUUGCAU    gugu u
  || ||| ||||||  ||||| ||||||||  |||||||||||    ||||  
  ga gaa agaacg  gguau acgugaca  aacgugaugua    caua c
-c  c   u      ga     a        ag           uccc    u 

Annotation confidence Not enough data

Genome context

gb|AAGJ06000011.1|: 28175082-28175182 [+]

Mature spu-miR-33-5p

• Accession: MIMAT0009658
• Description: Strongylocentrotus purpuratus spu-miR-33-5p mature miRNA
• Sequence: 21 - GUGCAUUGUCGUUGCAUUGCAU - 42
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68