Stem-loop spu-mir-71

Accession

MI0010196

Description

Strongylocentrotus purpuratus spu-mir-71 precursor miRNA mir-71

Gene
family

RF00832; mir-71

Literature search

1 open access papers mention spu-mir-71
(1 sentences)

Sequence

acagaaucgguguucccugagUGAAAGACAUGGGUAGUGAGAUUugacuaucacaaaacaaucucacuauucuguuuuuccccugguggauacuuauuaca
....(((.(((((((((.(.(.((((((((.(((((((((((((...............)))))))))))))))))))))).).)).))))))).)))...

Structure

acag   c       -  u a U        U             ugacua 
    aau gguguuc cc g g GAAAGACA GGGUAGUGAGAUU      u
    ||| ||||||| || | | |||||||| |||||||||||||      c
    uua ucauagg gg c c cuuuuugu cuuaucacucuaa      a
-aca   u       u  u c -        -             caaaac 

Annotation confidence Not enough data

Genome context

KN914598.1: 339455-339555 [+]

Mature spu-miR-71

• Accession: MIMAT0009660
• Description: Strongylocentrotus purpuratus spu-miR-71 mature miRNA
• Sequence: 22 - UGAAAGACAUGGGUAGUGAGAUU - 44
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68