Stem-loop spu-mir-92c

Accession

MI0010200

Description

Strongylocentrotus purpuratus spu-mir-92c precursor miRNA

Literature search

1 open access papers mention spu-mir-92c
(3 sentences)

Sequence

guagagggcagcaagcuggucgugaggaguugcaauuuguccacaugauaauaaucaucaUAUUGCACUCGUCCCGGCCUGCcugcuugcccucaaucuca
...((((((((((.((.(((((.((.((((.(((((.((.....(((((....))))))).))))))))).)).))))).)).))).))))))).......

Structure

----gua       -   a  u     u  g    u     u  uccac     a 
       gagggca gca gc ggucg ga gagu gcaau ug     augau a
       ||||||| ||| || ||||| || |||| ||||| ||     |||||  
       cucccgu cgu CG CCGGC CU CUCA CGUUA ac     uacua u
acucuaa       u   c  U     C  G    -     U  -----     a 

Annotation confidence Not enough data

Genome context

gb|AAGJ06000006.1|: 26944958-26945058 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from spu-mir-92c

Mature spu-miR-92c-3p

• Accession: MIMAT0009664
• Description: Strongylocentrotus purpuratus spu-miR-92c-3p mature miRNA
• Sequence: 61 - UAUUGCACUCGUCCCGGCCUGC - 82
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68