Stem-loop sko-mir-2012

Accession

MI0010265

Description

Saccoglossus kowalevskii sko-mir-2012 precursor miRNA mir-2012

Gene
family

RF03980; mir-2012

Sequence

auauuacuuggUAGUACUGGCAUAUGGACAUUGgugauuuaacucAAUGUUCAUAUUUCAGUAUUUCcaagugagau
...((((((((.((((((((.((((((((((((((......)).)))))))))))).)))))))).))))))))...

Structure

aua        U        C            -  ga 
   uuacuugg AGUACUGG AUAUGGACAUUG gu  u
   |||||||| |||||||| |||||||||||| ||   
   agugaacC UUAUGACU UAUACUUGUAAc ca  u
uag        U        U            u  au 

Annotation confidence Low

Genome context

GL016179.1: 444445-444521 [+]

Mature sko-miR-2012-5p

• Accession: MIMAT0009736
• Description: Saccoglossus kowalevskii sko-miR-2012-5p mature miRNA
• Sequence: 12 - UAGUACUGGCAUAUGGACAUUG - 33
• Evidence: experimental ; 454 [1]

Mature sko-miR-2012-3p

• Accession: MIMAT0019164
• Description: Saccoglossus kowalevskii sko-miR-2012-3p mature miRNA
• Sequence: 46 - AAUGUUCAUAUUUCAGUAUUUC - 67
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27