Stem-loop spu-mir-2012

Accession

MI0010270

Description

Strongylocentrotus purpuratus spu-mir-2012 precursor miRNA mir-2012

Gene
family

RF03980; mir-2012

Literature search

1 open access papers mention spu-mir-2012
(2 sentences)

Sequence

uggguucuugaUAGUACUGGCAUAUGGACAUUGuuguaauaaucuuacucucaauguucaucuguccguacugccaagugccug
.((((.((((.((((((.((((.((((((((((..((((.....))))...)))))))))).)))).)))))).)))).)))).

Structure

u    u    a      U    U          -uu    u 
 gggu cuug UAGUAC GGCA AUGGACAUUG   guaa a
 |||| |||| |||||| |||| ||||||||||   |||| a
 uccg gaac gucaug cugu uacuuguaac   cauu u
g    u    c      c    c          ucu    c 

Annotation confidence Not enough data

Genome context

gb|AAGJ06000018.1|: 2474068-2474151 [-]

Mature spu-miR-2012-5p

• Accession: MIMAT0009741
• Description: Strongylocentrotus purpuratus spu-miR-2012-5p mature miRNA
• Sequence: 12 - UAGUACUGGCAUAUGGACAUUG - 33
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19196333
   The deep evolution of metazoan microRNAs
   "Wheeler BM, Heimberg AM, Moy VN, Sperling EA, Holstein TW, Heber S, Peterson KJ"
   "Evol Dev (2009) 11:50-68