Stem-loop osa-MIR2055

Accession

MI0010489

Description

Oryza sativa osa-MIR2055 precursor miRNA

Literature search

3 open access papers mention osa-MIR2055
(25 sentences)

Sequence

94 reads, 71 reads per million, 2 experiments

agaagauggaggcaccagcccaaggaaacacagacauugacacgcaauucaaggagaagauugcguccuacuuUUUCCUUGGGAAGGUGGUUUCucuucu
((((((.((((.((((..((((((((((...((........((((((((.........))))))))....)).))))))))))..)))).))))))))))

Structure

      u    g    ag          cac  acauugac        caa 
agaaga ggag cacc  cccaaggaaa   ag        acgcaauu   g
|||||| |||| ||||  ||||||||||   ||        ||||||||   g
ucuucu CUUU GUGG  GGGUUCCUUU   uc        ugcguuag   a
      -    G    AA          --u  ----aucc        aag 

Annotation confidence Not enough data

Genome context

Chr9: 431432-431531 [-]

Mature osa-miR2055

• Accession: MIMAT0009980
• Description: Oryza sativa osa-miR2055 mature miRNA
• Sequence: 74 - UUUCCUUGGGAAGGUGGUUUC - 94
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19055717
   Identification of precursor transcripts for 6 novel miRNAs expands the diversity on the genomic organisation and expression of miRNA genes in rice
   Lacombe S, Nagasaki H, Santi C, Duval D, Piégu B, Bangratz M, Breitler JC, Guiderdoni E, Brugidou C, Hirsch J, Cao X, Brice C, Panaud O, Karlowski WM, Sato Y, Echeverria M
   BMC Plant Biol (2008) 8:123