Stem-loop bfl-mir-2058

Accession

MI0010493

Description

Branchiostoma floridae bfl-mir-2058 precursor miRNA

Gene family

MIPF0001793; mir-2058

Sequence

gcgaagUGAGAAGUAAGACUACCAUCCCGUgugugcuguaccgGGGUGGGGUCUUGCUUCUUUCUuagcggguuuacaacac
((.(((.(((((((((((((.((((((((.(((.....)))))))))))))))))))))))).))).)).............

Structure

-------------  g   U             A        U   u 
             gc aag GAGAAGUAAGACU CCAUCCCG gug g
             || ||| ||||||||||||| |||||||| ||| c
             cg uUC UUCUUCGUUCUGG GGUGGGgc cau u
cacaacauuuggg  a   U             -        -   g 

Annotation confidence Not enough data

Genome context

GG666509.1: 857171-857252 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bfl-mir-2058

Mature bfl-miR-2058-5p

• Accession: MIMAT0009984
• Description: Branchiostoma floridae bfl-miR-2058-5p mature miRNA
• Sequence: 7 - UGAGAAGUAAGACUACCAUCCCGU - 30
• Evidence: experimental ; cloned [1], 454 [2]

Mature bfl-miR-2058-3p

• Accession: MIMAT0019167
• Description: Branchiostoma floridae bfl-miR-2058-3p mature miRNA
• Sequence: 44 - GGGUGGGGUCUUGCUUCUUUCU - 65
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196332
   Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
   "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
   "Evol Dev (2009) 11:41-49


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27