Stem-loop bfl-mir-2062

Accession

MI0010497

Description

Branchiostoma floridae bfl-mir-2062 precursor miRNA

Sequence

ccugcucUGCAACAAUAUUUCAUCAGUGGugaacuccaaaaucuACUGGUGAAAUGUAGUUGCGUAggaggccggccacugu
(((.((.((((((.(((((((((((((((.............))))))))))))))).)))))).)).)))...........

Structure

-----------   g  c      A               ugaac 
           ccu cu UGCAAC AUAUUUCAUCAGUGG     u
           ||| || |||||| |||||||||||||||     c
           gga gA GCGUUG UGUAAAGUGGUCAuc     c
ugucaccggcc   g  U      A               uaaaa 

Annotation confidence Low

Genome context

GG666582.1: 2072211-2072292 [-]

Mature bfl-miR-2062-5p

• Accession: MIMAT0009988
• Description: Branchiostoma floridae bfl-miR-2062-5p mature miRNA
• Sequence: 8 - UGCAACAAUAUUUCAUCAGUGG - 29
• Evidence: experimental ; cloned [1], 454 [2]

Mature bfl-miR-2062-3p

• Accession: MIMAT0019169
• Description: Branchiostoma floridae bfl-miR-2062-3p mature miRNA
• Sequence: 45 - ACUGGUGAAAUGUAGUUGCGUA - 66
• Evidence: experimental ; 454 [2]

References

1. PubMed ID: 19196332
   Characterization of microRNAs in cephalochordates reveals a correlation between microRNA repertoire homology and morphological similarity in chordate evolution
   "Dai Z, Chen Z, Ye H, Zhou L, Cao L, Wang Y, Peng S, Chen L"
   "Evol Dev (2009) 11:41-49


2. PubMed ID: 21210939
   microRNA complements in deuterostomes: origin and evolution of microRNAs
   "Campo-Paysaa F, Semon M, Cameron RA, Peterson KJ, Schubert M"
   "Evol Dev (2011) 13:15-27