Stem-loop tca-mir-9a

Accession

MI0010583

Description

Tribolium castaneum tca-mir-9a precursor miRNA

Literature search

1 open access papers mention tca-mir-9a
(3 sentences)

Sequence

cugauauuuUCUUUGGUUAUCUAGCUGUAUgaguauuguuuaauaacaucAUAAAGCUAGGUUACCGGAGuuaaaaccagu
(((...((..(((((((.((((((((.(((((....((((....))))))))).)))))))).)))))))..))...))).

Structure

-   aua  uU       U        G     guau    u 
 cug   uu  CUUUGGU AUCUAGCU UAUga    uguu a
 |||   ||  ||||||| |||||||| |||||    ||||  
 gac   aa  GAGGCCA UGGAUCGA AUAcu    acaa a
u   caa  uu       U        A     ----    u 

Annotation confidence Not enough data

Genome context

Unknown

Mature tca-miR-9a-5p

• Accession: MIMAT0010090
• Description: Tribolium castaneum tca-miR-9a-5p mature miRNA
• Sequence: 10 - UCUUUGGUUAUCUAGCUGUAU - 30
• Evidence: experimental ; SOLID [1]

Mature tca-miR-9a-3p

• Accession: MIMAT0019177
• Description: Tribolium castaneum tca-miR-9a-3p mature miRNA
• Sequence: 51 - AUAAAGCUAGGUUACCGGAG - 70
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20817720
   Functional shifts in insect microRNA evolution
   "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
   "Genome Biol Evol (2010) 2:686-696