miRBase entry: tca-mir-263a

Stem-loop tca-mir-263a


Accession
MI0010586
Description
Tribolium castaneum tca-mir-263a precursor miRNA


Sequence

gugagcauaggccugcgAAUGGCACUGGAAGAAUUCACGGGguucuucgcacuccCGUGGACUUUGAGUGCCAUCCUCagagcccuugucc
....(((..((((((.(.((((((((.((((..((((((((((.......)).)))))))))))).)))))))).).))).)))..)))..

Structure
guga   ua   -   c A        G    AA        -  uc 
    gca  ggc cug g AUGGCACU GAAG  UUCACGGG gu  u
    |||  ||| ||| | |||||||| ||||  |||||||| ||  u
    ugu  ccg gaC C UACCGUGA UUUC  AGGUGCcc ca  c
--cc   uc   a   U C        G    --        u  cg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ChLG5: 13054978-13055068 [-]

Database links

Mature tca-miR-263a-5p

Accession MIMAT0010093
Description Tribolium castaneum tca-miR-263a-5p mature miRNA
Sequence 18 - AAUGGCACUGGAAGAAUUCACGGG - 41
Evidence experimental
SOLID [1]
Database links

Mature tca-miR-263a-3p

Accession MIMAT0019180
Description Tribolium castaneum tca-miR-263a-3p mature miRNA
Sequence 56 - CGUGGACUUUGAGUGCCAUCCUC - 78
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20817720
    Functional shifts in insect microRNA evolution
    "Marco A, Hui JH, Ronshaugen M, Griffiths-Jones S"
    "Genome Biol Evol (2010) 2:686-696