Accession
MI0010693
Description
Herpes Simplex Virus 2
hsv2-mir-H4 precursor miRNA
Sequence
ggggcgggaGAGUUCACUCGGCACGCAUGCacguguaaccgccaguCCGUGCUUGCCUAGCGAACUCacccguccc
((((((((.((((((.((.((((.(((((.(((((....)))..)).))))).)))).)).)))))).))))))))
((((((((.((((((.((.((((.(((((.(((((....)))..)).))))).)))).)).)))))).))))))))
Structure
a A C C C -- u
ggggcggg GAGUUC CU GGCA GCAUG ac gug a
|||||||| |||||| || |||| ||||| || |||
cccugccc CUCAAG GA CCGU CGUGC ug cgc a
a C U U C ac c
Annotation confidence
Not enough data
Do you think this miRNA is real?
Comments
This sequence was named miR-II in [1], but is a clear homolog of miR-H4 in HSV-1.
Genome context
Unknown
Database links
Mature hsv2-miR-H4-5p
| Accession | MIMAT0010203 |
| Description | Herpes Simplex Virus 2 hsv2-miR-H4-5p mature miRNA |
| Sequence | 10 - GAGUUCACUCGGCACGCAUGC - 30 |
| Evidence |
experimental
454 [1], Illumina [2-3] |
Mature hsv2-miR-H4-3p
| Accession | MIMAT0010204 |
| Description | Herpes Simplex Virus 2 hsv2-miR-H4-3p mature miRNA |
| Sequence | 47 - CCGUGCUUGCCUAGCGAACUC - 67 |
| Evidence |
experimental
454 [1], Illumina [2-3] |
References
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