Stem-loop sme-mir-753c

Accession

MI0010822

Description

Schmidtea mediterranea sme-mir-753c precursor miRNA

Sequence

uuuuaauaaaguauauuuaaAAGCUUGGAUUGUGAUCUCAuauauuuaugagaucauuauucaagcucuuaaauaauacuuuucaucaac
.......(((((((((((((.(((((((((.(((((((((((....))))))))))).))))))))).)))))).)))))))........

Structure

-uuuuaau       -      A         U           u 
        aaaguau auuuaa AGCUUGGAU GUGAUCUCAua a
        ||||||| |||||| ||||||||| |||||||||||  
        uuucaua uaaauu ucgaacuua uacuagaguau u
caacuacu       a      c         u           u 

Annotation confidence Not enough data

Genome context

Contig9004: 3190-3279 [+]

Mature sme-miR-753c

• Accession: MIMAT0011277
• Description: Schmidtea mediterranea sme-miR-753c mature miRNA
• Sequence: 21 - AAGCUUGGAUUGUGAUCUCA - 40
• Evidence: experimental ; 454 [1], Illumina [1]

References

1. PubMed ID: 19564616
   High-resolution profiling and discovery of planarian small RNAs
   "Friedlander MR, Adamidi C, Han T, Lebedeva S, Isenbarger TA, Hirst M, Marra M, Nusbaum C, Lee WL, Jenkin JC, Sanchez Alvarado A, Kim JK, Rajewsky N"
   "Proc Natl Acad Sci U S A (2009) 106:11546-11551