Stem-loop dre-mir-2191

Accession

MI0010842

Description

Danio rerio dre-mir-2191 precursor miRNA

Literature search

1 open access papers mention dre-mir-2191
(1 sentences)

Sequence

15301 reads, 18.0 reads per million, 194 experiments

gugccuugcucaagggucucaccucugcCAUGGUAUUGAAGGUGGUAGAGAguguuuguacauucacUCACACCUACAAUCCCUGGCAguacugagacucaaaccugcaa
......(((....((((((((...((((((.((.((((.(((((..((.((((((....)))))).))..))))).)))))).))))))...))))))))......))).

Structure

gugccu   --ucaa        ccu      U  U    A     GU  A      u 
      ugc      gggucuca   cugcCA GG AUUG AGGUG  AG GAgugu u
      |||      ||||||||   |||||| || |||| |||||  || ||||||  
      acg      cucagagu   gACGGU CC UAAC UCCAC  Uc cuuaca g
-----a   uccaaa        cau      C  -    A     AC  a      u 

Annotation confidence High

Genome context

chr23: 36790223-36790332 [+]

Mature dre-miR-2191-5p

• Accession: MIMAT0052800
• Description: Danio rerio dre-miR-2191-5p mature miRNA
• Sequence: 29 - CAUGGUAUUGAAGGUGGUAGAGA - 51
• Evidence: experimental ; 454 [1]

Mature dre-miR-2191-3p

• Accession: MIMAT0011300
• Description: Danio rerio dre-miR-2191-3p mature miRNA
• Sequence: 68 - UCACACCUACAAUCCCUGGCA - 88
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19397817
   Parallel DNA pyrosequencing unveils new zebrafish microRNAs
   Soares AR, Pereira PM, Santos B, Egas C, Gomes AC, Arrais J, Oliveira JL, Moura GR, Santos MA
   BMC Genomics (2009) 10:195