miRBase entry: dre-mir-2198

Stem-loop dre-mir-2198


Accession
MI0010847
Description
Danio rerio dre-mir-2198 precursor miRNA


Sequence

cggcgagcaauacucauaacucccaagcgccugcgaacgcaagcucuccuuaccccggugcagauggAGCUCGUGUCCCAAGGCGCCUccaggccuaaacccgggccugc
.((.(((............)))))..((((((....((((.((((((.(((((....))).))..)))))).))))....))))))...(((((((......))))))).

Structure
cggcgagcaauacucauaacucccaa      gcga    a      -c  -   c 
                          gcgccu    acgc agcucu  cu uac c
                          ||||||    |||| ||||||  || |||  
                          CGCGGA    UGUG UCGAgg  ga gug c
--cguccgggcccaaauccggaccUC      ACCC    C      ua  c   g 


Annotation confidence Not enough data
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Genome context
chr2: 36753649-36753758 [+]

Database links

Mature dre-miR-2198

Accession MIMAT0011305
Description Danio rerio dre-miR-2198 mature miRNA
Sequence 68 - AGCUCGUGUCCCAAGGCGCCU - 88
Evidence experimental
454 [1]

References

  1. PubMed ID: 19397817
    Parallel DNA pyrosequencing unveils new zebrafish microRNAs
    Soares AR, Pereira PM, Santos B, Egas C, Gomes AC, Arrais J, Oliveira JL, Moura GR, Santos MA
    BMC Genomics (2009) 10:195