miRBase entry: dre-mir-2197

Stem-loop dre-mir-2197


Accession
MI0010857
Description
Danio rerio dre-mir-2197 precursor miRNA


Sequence

aguguaaaaggaaaacguugugAUGAUUCGACUCAUAUGGUGcuaugcaguaauagagggcuggaagcauuuugcuugaggagagucuaaucacuagcagguacacauug
.(((((..........(((((((((((((..((((...((((((.(.((((........)))).))))))).....))))..)))))..))))).)))...)))))....

Structure
---a     aaaggaaaac   -     --     GA    --UAU      a g    aau 
    gugua          guu gugAU  GAUUC  CUCA     GGUGcu u cagu   a
    |||||          ||| |||||  |||||  ||||     |||||| | ||||    
    cacau          cga cacua  cugag  gagu     uuacga a gucg   g
guua     -------gga   u     au     ag    ucguu      - g    gga 


Annotation confidence Not enough data
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Genome context
chr1: 39373802-39373911 [-]

Database links

Mature dre-miR-2197

Accession MIMAT0011317
Description Danio rerio dre-miR-2197 mature miRNA
Sequence 23 - AUGAUUCGACUCAUAUGGUG - 42
Evidence experimental
454 [1]

References

  1. PubMed ID: 19397817
    Parallel DNA pyrosequencing unveils new zebrafish microRNAs
    Soares AR, Pereira PM, Santos B, Egas C, Gomes AC, Arrais J, Oliveira JL, Moura GR, Santos MA
    BMC Genomics (2009) 10:195