miRBase entry: sbi-MIR437c

Stem-loop sbi-MIR437c


Accession
MI0010904
Description
Sorghum bicolor sbi-MIR437c precursor miRNA

Literature search
3 open access papers mention sbi-MIR437c
(5 sentences)

Sequence

gucaaacuucuuuuaaauuuugauaaucaauaucuaacaauuuauauagguugacaacaaacgauugacaucaauagauuuauuaugaaaccauuuuuuuauaauauacgauucuuuucauuaagaugauauauuuucauaaauauugugaaucAAAGUUAGAGAAGUUUGACUU
(((((((((((((..(((((((((...((((((.((..((..(((((..(((((...(((....)))...))))).....((((((((((......))))))))))......((((......))))..)))))..))..)).))))))...))))))))))))))))))))))..

Structure
--             ua         aau      c  ac  uu     agguugacaacaaacgauugacaucaauagauu          cc 
  gucaaacuucuuu  aauuuugau   caauau ua  aa  uauau                                 uauuaugaaa  a
  |||||||||||||  |||||||||   |||||| ||  ||  |||||                                 ||||||||||   
  CAGUUUGAAGAGA  UUGAAAcua   guuaua au  uu  auaua                                 auaauauuuu  u
UU             --         agu      a  ac  uu     -----------guagaauuacuuuucuuagcau          uu 


Annotation confidence Not enough data
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Genome context
chr1: 20698964-20699138 [+]

Database links

Mature sbi-miR437c

Accession MIMAT0011364
Description Sorghum bicolor sbi-miR437c mature miRNA
Sequence 155 - AAAGUUAGAGAAGUUUGACUU - 175
Evidence not_experimental

References

  1. PubMed ID: 19936050
    A genome-wide characterization of microRNA genes in maize
    Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
    PLoS Genet (2009) 5:e1000716