Stem-loop sme-mir-2156b

Accession

MI0010933

Description

Schmidtea mediterranea sme-mir-2156b precursor miRNA

Sequence

uucauaacugaaaAAGGUUUUUGAGCCGUAAAUCAaaauaauauuugCCUUACGGCCCCUAAACCUUAUUucugaaaugaau
(((((....(((((((((((..(.(((((((..((((......))))..))))))).)..))))))).))))....))))).

Structure

-     aacu    -       UU A       AU    au 
 uucau    gaaa AAGGUUU  G GCCGUAA  CAaa  a
 |||||    |||| |||||||  | |||||||  ||||   
 aagua    cuUU UUCCAAA  C CGGCAUU  guuu  a
u     aagu    A       UC C       CC    au 

Annotation confidence Not enough data

Genome context

Contig877: 48519-48600 [+]

Mature sme-miR-2156b-5p

• Accession: MIMAT0011393
• Description: Schmidtea mediterranea sme-miR-2156b-5p mature miRNA
• Sequence: 14 - AAGGUUUUUGAGCCGUAAAUCA - 35
• Evidence: experimental ; Illumina [1]

Mature sme-miR-2156b-3p

• Accession: MIMAT0011394
• Description: Schmidtea mediterranea sme-miR-2156b-3p mature miRNA
• Sequence: 48 - CCUUACGGCCCCUAAACCUUAUU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19553344
   Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea
   "Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR"
   "RNA (2009) 15:1483-1491