Stem-loop sme-mir-753e

Accession

MI0010934

Description

Schmidtea mediterranea sme-mir-753e precursor miRNA

Sequence

16007 reads, 302.0 reads per million, 28 experiments

uaAGGCUUGAAUUGUGAUCUCAUaaaccuaUGAGAUCAUUAUUCAAGCUCUUcaaua
.(((((((((((.(((((((((((....))))))))))).)))))))).))).....

Structure

----u   -        U           a 
     aAG GCUUGAAU GUGAUCUCAUa a
     ||| |||||||| |||||||||||  
     UUC CGAACUUA UACUAGAGUau c
auaac   U        U           c 

Annotation confidence High

Comments

This sequence was named mir-753g in [1].

Genome context

gb|NNSW01000764.1|: 181519-181575 [+]

Mature sme-miR-753e-5p

• Accession: MIMAT0012168
• Description: Schmidtea mediterranea sme-miR-753e-5p mature miRNA
• Sequence: 3 - AGGCUUGAAUUGUGAUCUCAU - 23
• Evidence: experimental ; Illumina [1]

Mature sme-miR-753e-3p

• Accession: MIMAT0012169
• Description: Schmidtea mediterranea sme-miR-753e-3p mature miRNA
• Sequence: 31 - UGAGAUCAUUAUUCAAGCUCUU - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19553344
   Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea
   "Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR"
   "RNA (2009) 15:1483-1491