Stem-loop sme-mir-76

Accession

MI0010935

Description

Schmidtea mediterranea sme-mir-76 precursor miRNA

Literature search

1 open access papers mention sme-mir-76
(1 sentences)

Sequence

gauaaacauuuuUCAUUCUUAAACAAUGAAUAguuuuuccaugacaaaguaUUCGUUGUUUAUGAAUGAGAGAaauguuagcauuu
....((((((((((((((.(((((((((((((.(((.((...)).))).))))))))))))).))))))..)))))))).......

Structure

---gaua        --      U             g   u  c 
       aacauuuu  UCAUUC UAAACAAUGAAUA uuu uc  
       ||||||||  |||||| ||||||||||||| ||| || a
       uuguaaAG  AGUAAG AUUUGUUGCUUau aaa ag  
uuuacga        AG      U             g   c  u 

Annotation confidence Not enough data

Genome context

Contig18565: 5370-5455 [+]

Mature sme-miR-76-5p

• Accession: MIMAT0011396
• Description: Schmidtea mediterranea sme-miR-76-5p mature miRNA
• Sequence: 13 - UCAUUCUUAAACAAUGAAUA - 32
• Evidence: experimental ; Illumina [1]

Mature sme-miR-76-3p

• Accession: MIMAT0011397
• Description: Schmidtea mediterranea sme-miR-76-3p mature miRNA
• Sequence: 52 - UUCGUUGUUUAUGAAUGAGAGA - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19553344
   Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea
   "Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR"
   "RNA (2009) 15:1483-1491