Stem-loop sme-mir-2204

Accession

MI0010937

Description

Schmidtea mediterranea sme-mir-2204 precursor miRNA

Sequence

uacUGAAAUUAGGACGGAAAUUACACcaaucuaccaacaacguuaauuaguAAACAUCCGGACUAAGUUUAUacccaauc
...((((.((((..((((..((((...(((..((.......))..))).))))...))))..)))).)))).........

Structure

------uac    A    GA    -AA    ACc   cu  ca 
         UGAA UUAG  CGGA   UUAC   aau  ac  a
         |||| ||||  ||||   ||||   |||  ||  c
         AUUU AAUC  GCCU   AAug   uua  ug  a
cuaacccaU    G    AG    ACA    --a   au  ca 

Annotation confidence Not enough data

Genome context

Contig5212: 12347-12426 [-]

Mature sme-miR-2204-5p

• Accession: MIMAT0011398
• Description: Schmidtea mediterranea sme-miR-2204-5p mature miRNA
• Sequence: 4 - UGAAAUUAGGACGGAAAUUACAC - 26
• Evidence: experimental ; Illumina [1]

Mature sme-miR-2204-3p

• Accession: MIMAT0011399
• Description: Schmidtea mediterranea sme-miR-2204-3p mature miRNA
• Sequence: 52 - AAACAUCCGGACUAAGUUUAU - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19553344
   Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea
   "Lu YC, Smielewska M, Palakodeti D, Lovci MT, Aigner S, Yeo GW, Graveley BR"
   "RNA (2009) 15:1483-1491