Stem-loop dme-mir-2491

Accession

MI0011580

Description

Drosophila melanogaster dme-mir-2491 precursor miRNA

Literature search

1 open access papers mention dme-mir-2491
(5 sentences)

Sequence

18 reads, 5 reads per million, 10 experiments

cgcgaaccacuuugugcCGCUGUUGCCUUUGCAGUUGCUguuuuccauguugcuacugcggccaauuguugcgcaucagcaacaucaacaacauCAACAACAGCAGCAGCAAcugcaguagcagcacucgugauucacuuucga
.(.(((.(((...((((.((((((((..((((.(((((((((....((((((((..((((...........))))..)))))))).............))))))))).))))..)))))))).))))..))).))).)......

Structure

-----c c   c   uuu    C        CU    A         ---------uucc        ac    gcca 
      g gaa cac   gugc GCUGUUGC  UUGC GUUGCUguu             auguugcu  ugcg    a
      | ||| |||   |||| ||||||||  |||| |||||||||             ||||||||  ||||    u
      c cuu gug   cacg cgaugacg  AACG CGACGACAA             uacaacga  acgc    u
agcuuu a   a   -cu    a        uc    A         CAACuacaacaac        cu    guug 

Annotation confidence Not enough data

Genome context

chrX: 22833440-22833583 [-]

Mature dme-miR-2491-5p

• Accession: MIMAT0012198
• Description: Drosophila melanogaster dme-miR-2491-5p mature miRNA
• Sequence: 18 - CGCUGUUGCCUUUGCAGUUGCU - 39
• Evidence: experimental ; Illumina [1]

Mature dme-miR-2491-3p

• Accession: MIMAT0020912
• Description: Drosophila melanogaster dme-miR-2491-3p mature miRNA
• Sequence: 95 - CAACAACAGCAGCAGCAA - 112
• Evidence: not_experimental

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9