Stem-loop dme-mir-2494

Accession

MI0011583

Description

Drosophila melanogaster dme-mir-2494 precursor miRNA mir-2494

Gene
family

RF02518; mir-2494

Literature search

2 open access papers mention dme-mir-2494
(2 sentences)

Sequence

695 reads, 72 reads per million, 29 experiments

uccaucuuccgaccggcgaucaGUAAGUGCACCAGAUUGGGAAuaaccuucaaaagcugcaacuuaaauaUUCCCAGUAAUGUCCACUUACAAGgagccccugguuggaugggugga
(((((((((((((((((.....(((((((.((...((((((((((.......................))))))))))...)).))))))).....)))...))))))).)))))))

Structure

       -       ---   gauca       C  CAG          accuucaaaa 
uccaucu uccgacc   ggc     GUAAGUG AC   AUUGGGAAua          g
||||||| |||||||   |||     ||||||| ||   ||||||||||          c
agguggg agguugg   ccg     CAUUCAC UG   UGACCCUUau          u
       u       ucc   agGAA       C  UAA          aaauucaacg 

Annotation confidence High

Genome context

chr3R: 16618766-16618882 [+]

Mature dme-miR-2494-5p

• Accession: MIMAT0012202
• Description: Drosophila melanogaster dme-miR-2494-5p mature miRNA
• Sequence: 23 - GUAAGUGCACCAGAUUGGGAA - 43
• Evidence: experimental ; Illumina [1]

Mature dme-miR-2494-3p

• Accession: MIMAT0012203
• Description: Drosophila melanogaster dme-miR-2494-3p mature miRNA
• Sequence: 71 - UUCCCAGUAAUGUCCACUUACAAG - 94
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9