Stem-loop dme-mir-2496

Accession

MI0011585

Description

Drosophila melanogaster dme-mir-2496 precursor miRNA

Sequence

18 reads, 37 reads per million, 8 experiments

gugcgccgguGUGCGUGUGUGAGAGGCCAUCGUAaaagccuuguuugcgugcggaauuuaacuguuuucucgccgucugcgaauuGCGGGGCACUCACACACGCAUAuucagccgcac
((((((.((((((((((((((((..(((.((((((.....((((..(((.((((((..........))).))))))..)))).))))))))).))))))))))))))))..).)))))

Structure

     - -c                AG   A      aagcc    uu   u   -   uuua 
gugcg c  gguGUGCGUGUGUGAG  GCC UCGUAa     uugu  gcg gcg gaa    a
||||| |  ||||||||||||||||  ||| ||||||     ||||  ||| ||| |||     
cacgc g  uuAUACGCACACACUC  CGG GGCGuu     agcg  ugc cgc cuu    c
     c ac                -A   -      ----a    uc   -   u   uugu 

Annotation confidence Not enough data

Genome context

chrX: 2010300-2010417 [+]

Mature dme-miR-2496-5p

• Accession: MIMAT0012206
• Description: Drosophila melanogaster dme-miR-2496-5p mature miRNA
• Sequence: 11 - GUGCGUGUGUGAGAGGCCAUCGUA - 34
• Evidence: experimental ; Illumina [1]

Mature dme-miR-2496-3p

• Accession: MIMAT0012207
• Description: Drosophila melanogaster dme-miR-2496-3p mature miRNA
• Sequence: 86 - GCGGGGCACUCACACACGCAUA - 107
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9