Stem-loop dme-mir-2497

Accession

MI0011586

Description

Drosophila melanogaster dme-mir-2497 precursor miRNA

Sequence

84 reads, 8 reads per million, 18 experiments

gcacgucaucGUAAGCAUUGCAAAAUGUAGUUGUUaaauucgcucuucaaucauuaACAACAUUUACAAUGUUUGCAGgcugucaacguugauggc
((.(((((.(((.(((.(((((((.((((((((((((................))))))))...))))...))))))))))....))).)))))))

Structure

  a     u   ---A   A       --A    ---        auucgcu 
gc cguca cGU    AGC UUGCAAA   UGUA   GUUGUUaa       c
|| ||||| |||    ||| |||||||   ||||   ||||||||        
cg guagu gca    ucg GACGUUU   ACAU   CAACAauu       u
  -     u   acug   -       GUA    UUA        acuaacu 

Annotation confidence Not enough data

Genome context

chr2L: 16678240-16678335 [+]

Mature dme-miR-2497-5p

• Accession: MIMAT0012208
• Description: Drosophila melanogaster dme-miR-2497-5p mature miRNA
• Sequence: 11 - GUAAGCAUUGCAAAAUGUAGUUGUU - 35
• Evidence: experimental ; Illumina [1]

Mature dme-miR-2497-3p

• Accession: MIMAT0012209
• Description: Drosophila melanogaster dme-miR-2497-3p mature miRNA
• Sequence: 57 - ACAACAUUUACAAUGUUUGCAG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9