Stem-loop dps-mir-957

Accession

MI0011597

Description

Drosophila pseudoobscura dps-mir-957 precursor miRNA

Sequence

79637 reads, 1680.0 reads per million, 22 experiments

uguccacaauggacCUUAGUUUUCGACGUGUUUUGGUGugcuggggaguugauauuccgauUGAAACCGUCCAAAACUGAGGCcaacugugcggcau
((((((((.(((.((((((((((.((((.((((((((.......(((((....))))).)))))))))))).)))))))))))))..)))).)))).

Structure

-    -    -a   a          C    U        Gugcugg     u 
 uguc caca  ugg cCUUAGUUUU GACG GUUUUGGU       ggagu g
 |||| ||||  ||| |||||||||| |||| ||||||||       |||||  
 acgg gugu  acC GGAGUCAAAA CUGC CAAAGUua       ccuua a
u    c    ca   -          C    -        ------g     u 

Annotation confidence High

Genome context

ref|NC_046683.1|: 56464390-56464486 [+]

Mature dps-miR-957-5p

• Accession: MIMAT0012229
• Description: Drosophila pseudoobscura dps-miR-957-5p mature miRNA
• Sequence: 15 - CUUAGUUUUCGACGUGUUUUGGUG - 38
• Evidence: experimental ; Illumina [1]

Mature dps-miR-957-3p

• Accession: MIMAT0012230
• Description: Drosophila pseudoobscura dps-miR-957-3p mature miRNA
• Sequence: 62 - UGAAACCGUCCAAAACUGAGGC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9