Accession
MI0011643
Description
Drosophila pseudoobscura
dps-mir-2518-3 precursor miRNA
Sequence
1669
reads,
12.0
reads per million, 18 experiments
cggccaacgggcagccacacacacacacaCGACCGGAUCGAACCCGUUGCGaaucgaacuugguuugaguucgagcagCGGGUCGAUCCGAGCCAUAGCCCAgcc
.(((....((((..................(..((((((((.((((((((...((((((((.....))))))))))))))))))))))))..)....)))).)))
.(((....((((..................(..((((((((.((((((((...((((((((.....))))))))))))))))))))))))..)....)))).)))
Structure
c caac agccacacacacacacaC AC A Gaa g ggc gggc G CGGAUCGA CCCGUUGC ucgaacuu g ||| |||| | |||||||| |||||||| |||||||| u ccg CCCG C GCCUAGCU GGGCgacg agcuugag u - ---A --------------AUAC GA - --- u
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
ref|NW_022881705.1|: 67775-67879 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from dps-mir-2518-3
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature dps-miR-2518-5p
| Accession | MIMAT0053430 |
| Description | Drosophila pseudoobscura dps-miR-2518-5p mature miRNA |
| Sequence | 30 - CGACCGGAUCGAACCCGUUGCG - 51 |
| Evidence |
experimental
Illumina [1] |
Mature dps-miR-2518-3p
| Accession | MIMAT0012301 |
| Description | Drosophila pseudoobscura dps-miR-2518-3p mature miRNA |
| Sequence | 79 - CGGGUCGAUCCGAGCCAUAGCCCA - 102 |
| Evidence |
experimental
Illumina [1] |
References
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